node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC37315.1 | SFC37348.1 | SAMN05216284_104115 | SAMN05216284_104116 | Hypothetical protein. | PglZ domain-containing protein. | 0.976 |
SFC37315.1 | SFC37400.1 | SAMN05216284_104115 | SAMN05216284_104117 | Hypothetical protein. | P-loop protein of unknown function. | 0.957 |
SFC37315.1 | rplB | SAMN05216284_104115 | SAMN05216284_106298 | Hypothetical protein. | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.946 |
SFC37315.1 | rplE | SAMN05216284_104115 | SAMN05216284_106307 | Hypothetical protein. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.945 |
SFC37315.1 | rplF | SAMN05216284_104115 | SAMN05216284_106310 | Hypothetical protein. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.947 |
SFC37315.1 | rplK | SAMN05216284_104115 | SAMN05216284_106279 | Hypothetical protein. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.945 |
SFC37315.1 | rplM | SAMN05216284_104115 | SAMN05216284_12714 | Hypothetical protein. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.948 |
SFC37315.1 | rplN | SAMN05216284_104115 | SAMN05216284_106305 | Hypothetical protein. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.945 |
SFC37315.1 | rplR | SAMN05216284_104115 | SAMN05216284_106311 | Hypothetical protein. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.946 |
SFC37315.1 | rplW | SAMN05216284_104115 | SAMN05216284_106297 | Hypothetical protein. | LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family. | 0.945 |
SFC37348.1 | SFC37315.1 | SAMN05216284_104116 | SAMN05216284_104115 | PglZ domain-containing protein. | Hypothetical protein. | 0.976 |
SFC37348.1 | SFC37400.1 | SAMN05216284_104116 | SAMN05216284_104117 | PglZ domain-containing protein. | P-loop protein of unknown function. | 0.956 |
SFC37400.1 | SFC37315.1 | SAMN05216284_104117 | SAMN05216284_104115 | P-loop protein of unknown function. | Hypothetical protein. | 0.957 |
SFC37400.1 | SFC37348.1 | SAMN05216284_104117 | SAMN05216284_104116 | P-loop protein of unknown function. | PglZ domain-containing protein. | 0.956 |
rplB | SFC37315.1 | SAMN05216284_106298 | SAMN05216284_104115 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Hypothetical protein. | 0.946 |
rplB | rplE | SAMN05216284_106298 | SAMN05216284_106307 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.999 |
rplB | rplF | SAMN05216284_106298 | SAMN05216284_106310 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.999 |
rplB | rplK | SAMN05216284_106298 | SAMN05216284_106279 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.999 |
rplB | rplM | SAMN05216284_106298 | SAMN05216284_12714 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
rplB | rplN | SAMN05216284_106298 | SAMN05216284_106305 | LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.999 |