Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFB78693.1 | SFC08486.1 | SAMN05216284_10180 | SAMN05216284_102447 | Predicted ATPase. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.962 |
SFB78693.1 | SFC39324.1 | SAMN05216284_10180 | SAMN05216284_104172 | Predicted ATPase. | AAA ATPase domain-containing protein. | 0.654 |
SFB78693.1 | SFC40312.1 | SAMN05216284_10180 | SAMN05216284_104201 | Predicted ATPase. | 3',5'-cyclic AMP phosphodiesterase CpdA. | 0.634 |
SFB78693.1 | SFC44549.1 | SAMN05216284_10180 | SAMN05216284_104327 | Predicted ATPase. | Hypothetical protein. | 0.442 |
SFB78693.1 | SFC69182.1 | SAMN05216284_10180 | SAMN05216284_106270 | Predicted ATPase. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.796 |
SFB78693.1 | SFC78621.1 | SAMN05216284_10180 | SAMN05216284_107155 | Predicted ATPase. | Signal transduction histidine kinase. | 0.985 |
SFB78693.1 | SFD57979.1 | SAMN05216284_10180 | SAMN05216284_11972 | Predicted ATPase. | AAA ATPase domain-containing protein. | 0.687 |
SFC08486.1 | SFB78693.1 | SAMN05216284_102447 | SAMN05216284_10180 | Diguanylate cyclase (GGDEF) domain-containing protein. | Predicted ATPase. | 0.962 |
SFC08486.1 | SFC39324.1 | SAMN05216284_102447 | SAMN05216284_104172 | Diguanylate cyclase (GGDEF) domain-containing protein. | AAA ATPase domain-containing protein. | 0.962 |
SFC08486.1 | SFC40312.1 | SAMN05216284_102447 | SAMN05216284_104201 | Diguanylate cyclase (GGDEF) domain-containing protein. | 3',5'-cyclic AMP phosphodiesterase CpdA. | 0.735 |
SFC08486.1 | SFC69182.1 | SAMN05216284_102447 | SAMN05216284_106270 | Diguanylate cyclase (GGDEF) domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SFC08486.1 | SFC78621.1 | SAMN05216284_102447 | SAMN05216284_107155 | Diguanylate cyclase (GGDEF) domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
SFC08486.1 | SFD57979.1 | SAMN05216284_102447 | SAMN05216284_11972 | Diguanylate cyclase (GGDEF) domain-containing protein. | AAA ATPase domain-containing protein. | 0.975 |
SFC39324.1 | SFB78693.1 | SAMN05216284_104172 | SAMN05216284_10180 | AAA ATPase domain-containing protein. | Predicted ATPase. | 0.654 |
SFC39324.1 | SFC08486.1 | SAMN05216284_104172 | SAMN05216284_102447 | AAA ATPase domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.962 |
SFC39324.1 | SFC40312.1 | SAMN05216284_104172 | SAMN05216284_104201 | AAA ATPase domain-containing protein. | 3',5'-cyclic AMP phosphodiesterase CpdA. | 0.634 |
SFC39324.1 | SFC44549.1 | SAMN05216284_104172 | SAMN05216284_104327 | AAA ATPase domain-containing protein. | Hypothetical protein. | 0.442 |
SFC39324.1 | SFC69182.1 | SAMN05216284_104172 | SAMN05216284_106270 | AAA ATPase domain-containing protein. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.796 |
SFC39324.1 | SFC78621.1 | SAMN05216284_104172 | SAMN05216284_107155 | AAA ATPase domain-containing protein. | Signal transduction histidine kinase. | 0.985 |
SFC39324.1 | SFD57979.1 | SAMN05216284_104172 | SAMN05216284_11972 | AAA ATPase domain-containing protein. | AAA ATPase domain-containing protein. | 0.691 |
page 1 of 3