Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC14823.1 | SFC44978.1 | SAMN05216284_1038 | SAMN05216284_104340 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | Hypothetical protein. | 0.609 |
SFC14823.1 | SFD35258.1 | SAMN05216284_1038 | SAMN05216284_115126 | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.732 |
SFC44848.1 | SFC44879.1 | SAMN05216284_104336 | SAMN05216284_104337 | Hypothetical protein. | FtsK/SpoIIIE family protein. | 0.804 |
SFC44848.1 | SFC44978.1 | SAMN05216284_104336 | SAMN05216284_104340 | Hypothetical protein. | Hypothetical protein. | 0.515 |
SFC44879.1 | SFC44848.1 | SAMN05216284_104337 | SAMN05216284_104336 | FtsK/SpoIIIE family protein. | Hypothetical protein. | 0.804 |
SFC44879.1 | SFC44978.1 | SAMN05216284_104337 | SAMN05216284_104340 | FtsK/SpoIIIE family protein. | Hypothetical protein. | 0.479 |
SFC44978.1 | SFC14823.1 | SAMN05216284_104340 | SAMN05216284_1038 | Hypothetical protein. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.609 |
SFC44978.1 | SFC44848.1 | SAMN05216284_104340 | SAMN05216284_104336 | Hypothetical protein. | Hypothetical protein. | 0.515 |
SFC44978.1 | SFC44879.1 | SAMN05216284_104340 | SAMN05216284_104337 | Hypothetical protein. | FtsK/SpoIIIE family protein. | 0.479 |
SFC44978.1 | SFC45008.1 | SAMN05216284_104340 | SAMN05216284_104341 | Hypothetical protein. | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | 0.545 |
SFC44978.1 | SFC45045.1 | SAMN05216284_104340 | SAMN05216284_104342 | Hypothetical protein. | Hypothetical protein. | 0.516 |
SFC44978.1 | SFC45075.1 | SAMN05216284_104340 | SAMN05216284_104343 | Hypothetical protein. | Protein of unknown function. | 0.516 |
SFC44978.1 | SFC63041.1 | SAMN05216284_104340 | SAMN05216284_10638 | Hypothetical protein. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.615 |
SFC44978.1 | SFD35258.1 | SAMN05216284_104340 | SAMN05216284_115126 | Hypothetical protein. | 2-oxoglutarate ferredoxin oxidoreductase subunit alpha. | 0.531 |
SFC44978.1 | SFD75940.1 | SAMN05216284_104340 | SAMN05216284_12424 | Hypothetical protein. | 5'-nucleotidase. | 0.593 |
SFC44978.1 | nadE | SAMN05216284_104340 | SAMN05216284_101170 | Hypothetical protein. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.640 |
SFC45008.1 | SFC44978.1 | SAMN05216284_104341 | SAMN05216284_104340 | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | Hypothetical protein. | 0.545 |
SFC45008.1 | SFC45045.1 | SAMN05216284_104341 | SAMN05216284_104342 | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | Hypothetical protein. | 0.746 |
SFC45008.1 | SFC45075.1 | SAMN05216284_104341 | SAMN05216284_104343 | ATP-dependent Clp protease ATP-binding subunit ClpC; Belongs to the ClpA/ClpB family. | Protein of unknown function. | 0.766 |
SFC45045.1 | SFC44978.1 | SAMN05216284_104342 | SAMN05216284_104340 | Hypothetical protein. | Hypothetical protein. | 0.516 |
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