SFC67246.1 protein (Verrucosispora sediminis)

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Predicted Interactions

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Score

SFC67246.1

RNA polymerase sigma-70 factor, ECF subfamily. (315 aa)

Predicted Functional Partners:

SFC67222.1

0.989

SFD18265.1

0.725

SFD11196.1

0.674

SFC89621.1

0.652

SFD36712.1

0.635

SFD72967.1

0.627

SFD35489.1

0.615

rpoC

0.584

rpoB

0.573

rpoA

0.533

Your Current Organism:

Verrucosispora sediminis

NCBI taxonomy Id: 547162
Other names: CGMCC 4.3550, JCM 15670, V. sediminis, Verrucosispora sediminis Dai et al. 2010, Verrucosispora sp. MS426, strain MS426

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SFC67222.1	SFC67246.1	SAMN05216284_106188	SAMN05216284_106189	Hypothetical protein.	RNA polymerase sigma-70 factor, ECF subfamily.	0.989
SFC67222.1	SFC89621.1	SAMN05216284_106188	SAMN05216284_108136	Hypothetical protein.	RNA polymerase sigma-70 factor, ECF subfamily.	0.467
SFC67222.1	SFD11196.1	SAMN05216284_106188	SAMN05216284_11150	Hypothetical protein.	RNA polymerase sigma-70 factor, ECF subfamily.	0.858
SFC67222.1	SFD18265.1	SAMN05216284_106188	SAMN05216284_112130	Hypothetical protein.	RNA polymerase sigma-70 factor, ECF subfamily.	0.858
SFC67222.1	SFD35489.1	SAMN05216284_106188	SAMN05216284_115135	Hypothetical protein.	RNA polymerase sigma-70 factor, ECF subfamily.	0.467
SFC67222.1	SFD36712.1	SAMN05216284_106188	SAMN05216284_115189	Hypothetical protein.	RNA polymerase sigma-70 factor, ECF subfamily.	0.467
SFC67222.1	SFD72967.1	SAMN05216284_106188	SAMN05216284_12320	Hypothetical protein.	RNA polymerase sigma-70 factor, ECF subfamily.	0.467
SFC67246.1	SFC67222.1	SAMN05216284_106189	SAMN05216284_106188	RNA polymerase sigma-70 factor, ECF subfamily.	Hypothetical protein.	0.989
SFC67246.1	SFC89621.1	SAMN05216284_106189	SAMN05216284_108136	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.652
SFC67246.1	SFD11196.1	SAMN05216284_106189	SAMN05216284_11150	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.674
SFC67246.1	SFD18265.1	SAMN05216284_106189	SAMN05216284_112130	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.725
SFC67246.1	SFD35489.1	SAMN05216284_106189	SAMN05216284_115135	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.615
SFC67246.1	SFD36712.1	SAMN05216284_106189	SAMN05216284_115189	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.635
SFC67246.1	SFD72967.1	SAMN05216284_106189	SAMN05216284_12320	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.627
SFC67246.1	rpoA	SAMN05216284_106189	SAMN05216284_106323	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.533
SFC67246.1	rpoB	SAMN05216284_106189	SAMN05216284_106285	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.573
SFC67246.1	rpoC	SAMN05216284_106189	SAMN05216284_106286	RNA polymerase sigma-70 factor, ECF subfamily.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.584
SFC89621.1	SFC67222.1	SAMN05216284_108136	SAMN05216284_106188	RNA polymerase sigma-70 factor, ECF subfamily.	Hypothetical protein.	0.467
SFC89621.1	SFC67246.1	SAMN05216284_108136	SAMN05216284_106189	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.652
SFC89621.1	SFD11196.1	SAMN05216284_108136	SAMN05216284_11150	RNA polymerase sigma-70 factor, ECF subfamily.	RNA polymerase sigma-70 factor, ECF subfamily.	0.738