Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFB81579.1 | SFC03303.1 | SAMN05216284_101201 | SAMN05216284_102274 | Non-specific serine/threonine protein kinase. | DEAD/DEAH box helicase. | 0.992 |
SFB81579.1 | SFC03368.1 | SAMN05216284_101201 | SAMN05216284_102276 | Non-specific serine/threonine protein kinase. | Hypothetical protein. | 0.828 |
SFB81579.1 | SFC25841.1 | SAMN05216284_101201 | SAMN05216284_103341 | Non-specific serine/threonine protein kinase. | 5'-3' exonuclease. | 0.926 |
SFB81579.1 | SFC65202.1 | SAMN05216284_101201 | SAMN05216284_106109 | Non-specific serine/threonine protein kinase. | ATP-dependent DNA helicase DinG. | 0.828 |
SFB81579.1 | SFC82391.1 | SAMN05216284_101201 | SAMN05216284_107295 | Non-specific serine/threonine protein kinase. | DNA excision repair protein ERCC-3. | 0.861 |
SFB81579.1 | polA | SAMN05216284_101201 | SAMN05216284_101437 | Non-specific serine/threonine protein kinase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.962 |
SFB81579.1 | rpoA | SAMN05216284_101201 | SAMN05216284_106323 | Non-specific serine/threonine protein kinase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.989 |
SFB81579.1 | rpoB | SAMN05216284_101201 | SAMN05216284_106285 | Non-specific serine/threonine protein kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.989 |
SFB81579.1 | rpoC | SAMN05216284_101201 | SAMN05216284_106286 | Non-specific serine/threonine protein kinase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.970 |
SFB81579.1 | rpoZ | SAMN05216284_101201 | SAMN05216284_10867 | Non-specific serine/threonine protein kinase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.989 |
SFC03303.1 | SFB81579.1 | SAMN05216284_102274 | SAMN05216284_101201 | DEAD/DEAH box helicase. | Non-specific serine/threonine protein kinase. | 0.992 |
SFC03303.1 | SFC03368.1 | SAMN05216284_102274 | SAMN05216284_102276 | DEAD/DEAH box helicase. | Hypothetical protein. | 0.752 |
SFC03303.1 | SFC25841.1 | SAMN05216284_102274 | SAMN05216284_103341 | DEAD/DEAH box helicase. | 5'-3' exonuclease. | 0.997 |
SFC03303.1 | SFC65202.1 | SAMN05216284_102274 | SAMN05216284_106109 | DEAD/DEAH box helicase. | ATP-dependent DNA helicase DinG. | 0.760 |
SFC03303.1 | SFC82391.1 | SAMN05216284_102274 | SAMN05216284_107295 | DEAD/DEAH box helicase. | DNA excision repair protein ERCC-3. | 0.987 |
SFC03303.1 | polA | SAMN05216284_102274 | SAMN05216284_101437 | DEAD/DEAH box helicase. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.999 |
SFC03303.1 | rpoA | SAMN05216284_102274 | SAMN05216284_106323 | DEAD/DEAH box helicase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.994 |
SFC03303.1 | rpoB | SAMN05216284_102274 | SAMN05216284_106285 | DEAD/DEAH box helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
SFC03303.1 | rpoC | SAMN05216284_102274 | SAMN05216284_106286 | DEAD/DEAH box helicase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.940 |
SFC03303.1 | rpoZ | SAMN05216284_102274 | SAMN05216284_10867 | DEAD/DEAH box helicase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.994 |
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