Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFB87708.1 | SFC26689.1 | SAMN05216284_101450 | SAMN05216284_103366 | Cellulose binding domain-containing protein. | Glycosyl hydrolase family 65, N-terminal domain. | 0.507 |
SFB87708.1 | SFC54489.1 | SAMN05216284_101450 | SAMN05216284_105191 | Cellulose binding domain-containing protein. | Poly(3-hydroxybutyrate) depolymerase. | 0.506 |
SFB87708.1 | SFC56225.1 | SAMN05216284_101450 | SAMN05216284_105251 | Cellulose binding domain-containing protein. | Poly(3-hydroxybutyrate) depolymerase. | 0.534 |
SFB87708.1 | SFC88907.1 | SAMN05216284_101450 | SAMN05216284_10899 | Cellulose binding domain-containing protein. | Endo-1,4-beta-xylanase, GH35 family. | 0.447 |
SFB87708.1 | SFD12586.1 | SAMN05216284_101450 | SAMN05216284_111127 | Cellulose binding domain-containing protein. | Hypothetical protein. | 0.497 |
SFC25640.1 | SFC88907.1 | SAMN05216284_103335 | SAMN05216284_10899 | alpha-N-arabinofuranosidase. | Endo-1,4-beta-xylanase, GH35 family. | 0.426 |
SFC25640.1 | SFD78826.1 | SAMN05216284_103335 | SAMN05216284_12612 | alpha-N-arabinofuranosidase. | Ig-like domain (group 3). | 0.401 |
SFC26689.1 | SFB87708.1 | SAMN05216284_103366 | SAMN05216284_101450 | Glycosyl hydrolase family 65, N-terminal domain. | Cellulose binding domain-containing protein. | 0.507 |
SFC26689.1 | SFC52590.1 | SAMN05216284_103366 | SAMN05216284_105119 | Glycosyl hydrolase family 65, N-terminal domain. | Enterochelin esterase. | 0.467 |
SFC26689.1 | SFC88907.1 | SAMN05216284_103366 | SAMN05216284_10899 | Glycosyl hydrolase family 65, N-terminal domain. | Endo-1,4-beta-xylanase, GH35 family. | 0.592 |
SFC26689.1 | SFD12586.1 | SAMN05216284_103366 | SAMN05216284_111127 | Glycosyl hydrolase family 65, N-terminal domain. | Hypothetical protein. | 0.577 |
SFC26689.1 | SFD78826.1 | SAMN05216284_103366 | SAMN05216284_12612 | Glycosyl hydrolase family 65, N-terminal domain. | Ig-like domain (group 3). | 0.650 |
SFC38233.1 | SFC88907.1 | SAMN05216284_104141 | SAMN05216284_10899 | Raffinose/stachyose/melibiose transport system substrate-binding protein. | Endo-1,4-beta-xylanase, GH35 family. | 0.488 |
SFC52590.1 | SFC26689.1 | SAMN05216284_105119 | SAMN05216284_103366 | Enterochelin esterase. | Glycosyl hydrolase family 65, N-terminal domain. | 0.467 |
SFC52590.1 | SFC54489.1 | SAMN05216284_105119 | SAMN05216284_105191 | Enterochelin esterase. | Poly(3-hydroxybutyrate) depolymerase. | 0.457 |
SFC52590.1 | SFC56225.1 | SAMN05216284_105119 | SAMN05216284_105251 | Enterochelin esterase. | Poly(3-hydroxybutyrate) depolymerase. | 0.458 |
SFC52590.1 | SFC88907.1 | SAMN05216284_105119 | SAMN05216284_10899 | Enterochelin esterase. | Endo-1,4-beta-xylanase, GH35 family. | 0.516 |
SFC52590.1 | SFD12586.1 | SAMN05216284_105119 | SAMN05216284_111127 | Enterochelin esterase. | Hypothetical protein. | 0.612 |
SFC54489.1 | SFB87708.1 | SAMN05216284_105191 | SAMN05216284_101450 | Poly(3-hydroxybutyrate) depolymerase. | Cellulose binding domain-containing protein. | 0.506 |
SFC54489.1 | SFC52590.1 | SAMN05216284_105191 | SAMN05216284_105119 | Poly(3-hydroxybutyrate) depolymerase. | Enterochelin esterase. | 0.457 |
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