STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFD56348.1Osmoprotectant transport system ATP-binding protein. (331 aa)    
Predicted Functional Partners:
SFD56257.1
Osmoprotectant transport system substrate-binding protein.
 
 0.998
SFD56289.1
Osmoprotectant transport system permease protein.
 0.998
SFD56316.1
Osmoprotectant transport system permease protein.
 0.998
SFB78454.1
Glycine betaine/proline transport system permease protein/glycine betaine/proline transport system substrate-binding protein.
 
 
 0.948
SFC16154.1
Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
   
  0.909
SFB78476.1
Glycine betaine/proline transport system substrate-binding protein.
  
 
 0.899
SFC71075.1
NitT/TauT family transport system permease protein.
  
  0.884
SFC21637.1
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
  
  0.874
SFB78435.1
Glycine betaine/proline transport system ATP-binding protein.
  
 
 
0.867
SFD13237.1
Spermidine/putrescine transport system permease protein.
  
  
  0.866
Your Current Organism:
Verrucosispora sediminis
NCBI taxonomy Id: 547162
Other names: CGMCC 4.3550, JCM 15670, V. sediminis, Verrucosispora sediminis Dai et al. 2010, Verrucosispora sp. MS426, strain MS426
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.