Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC27880.1 | SFD73683.1 | SAMN05216284_103402 | SAMN05216284_12349 | DNA-binding transcriptional regulator, MarR family. | Transcriptional regulator, TetR family. | 0.573 |
SFC40991.1 | SFD73683.1 | SAMN05216284_104220 | SAMN05216284_12349 | Pimeloyl-ACP methyl ester carboxylesterase. | Transcriptional regulator, TetR family. | 0.469 |
SFD16146.1 | SFD73683.1 | SAMN05216284_11223 | SAMN05216284_12349 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.598 |
SFD73659.1 | SFD73683.1 | SAMN05216284_12348 | SAMN05216284_12349 | SnoaL-like domain-containing protein. | Transcriptional regulator, TetR family. | 0.710 |
SFD73683.1 | SFC27880.1 | SAMN05216284_12349 | SAMN05216284_103402 | Transcriptional regulator, TetR family. | DNA-binding transcriptional regulator, MarR family. | 0.573 |
SFD73683.1 | SFC40991.1 | SAMN05216284_12349 | SAMN05216284_104220 | Transcriptional regulator, TetR family. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.469 |
SFD73683.1 | SFD16146.1 | SAMN05216284_12349 | SAMN05216284_11223 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.598 |
SFD73683.1 | SFD73659.1 | SAMN05216284_12349 | SAMN05216284_12348 | Transcriptional regulator, TetR family. | SnoaL-like domain-containing protein. | 0.710 |
SFD73683.1 | SFD73712.1 | SAMN05216284_12349 | SAMN05216284_12350 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.526 |
SFD73712.1 | SFD73683.1 | SAMN05216284_12350 | SAMN05216284_12349 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.526 |