Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFC06447.1 | SFD24268.1 | SAMN05216284_102383 | SAMN05216284_113146 | Uncharacterized protein YjbI, contains pentapeptide repeats. | Putative adhesin. | 0.505 |
SFC06447.1 | SFD78910.1 | SAMN05216284_102383 | SAMN05216284_12615 | Uncharacterized protein YjbI, contains pentapeptide repeats. | Cellulose binding domain-containing protein. | 0.454 |
SFC17523.1 | SFC17546.1 | SAMN05216284_10386 | SAMN05216284_10387 | VTC domain-containing protein. | Protein of unknown function. | 0.962 |
SFC17523.1 | SFD78910.1 | SAMN05216284_10386 | SAMN05216284_12615 | VTC domain-containing protein. | Cellulose binding domain-containing protein. | 0.693 |
SFC17546.1 | SFC17523.1 | SAMN05216284_10387 | SAMN05216284_10386 | Protein of unknown function. | VTC domain-containing protein. | 0.962 |
SFC17546.1 | SFD78910.1 | SAMN05216284_10387 | SAMN05216284_12615 | Protein of unknown function. | Cellulose binding domain-containing protein. | 0.749 |
SFD24268.1 | SFC06447.1 | SAMN05216284_113146 | SAMN05216284_102383 | Putative adhesin. | Uncharacterized protein YjbI, contains pentapeptide repeats. | 0.505 |
SFD24268.1 | SFD78910.1 | SAMN05216284_113146 | SAMN05216284_12615 | Putative adhesin. | Cellulose binding domain-containing protein. | 0.530 |
SFD47749.1 | SFD78910.1 | SAMN05216284_117125 | SAMN05216284_12615 | N-acetylmuramoyl-L-alanine amidase. | Cellulose binding domain-containing protein. | 0.450 |
SFD47749.1 | guaA | SAMN05216284_117125 | SAMN05216284_10928 | N-acetylmuramoyl-L-alanine amidase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.468 |
SFD78873.1 | SFD78910.1 | SAMN05216284_12614 | SAMN05216284_12615 | Hypothetical protein. | Cellulose binding domain-containing protein. | 0.558 |
SFD78910.1 | SFC06447.1 | SAMN05216284_12615 | SAMN05216284_102383 | Cellulose binding domain-containing protein. | Uncharacterized protein YjbI, contains pentapeptide repeats. | 0.454 |
SFD78910.1 | SFC17523.1 | SAMN05216284_12615 | SAMN05216284_10386 | Cellulose binding domain-containing protein. | VTC domain-containing protein. | 0.693 |
SFD78910.1 | SFC17546.1 | SAMN05216284_12615 | SAMN05216284_10387 | Cellulose binding domain-containing protein. | Protein of unknown function. | 0.749 |
SFD78910.1 | SFD24268.1 | SAMN05216284_12615 | SAMN05216284_113146 | Cellulose binding domain-containing protein. | Putative adhesin. | 0.530 |
SFD78910.1 | SFD47749.1 | SAMN05216284_12615 | SAMN05216284_117125 | Cellulose binding domain-containing protein. | N-acetylmuramoyl-L-alanine amidase. | 0.450 |
SFD78910.1 | SFD78873.1 | SAMN05216284_12615 | SAMN05216284_12614 | Cellulose binding domain-containing protein. | Hypothetical protein. | 0.558 |
SFD78910.1 | SFD78933.1 | SAMN05216284_12615 | SAMN05216284_12616 | Cellulose binding domain-containing protein. | DNA-binding transcriptional regulator, ArsR family. | 0.433 |
SFD78910.1 | guaA | SAMN05216284_12615 | SAMN05216284_10928 | Cellulose binding domain-containing protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.647 |
SFD78910.1 | guaB | SAMN05216284_12615 | SAMN05216284_10922 | Cellulose binding domain-containing protein. | IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.461 |
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