STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSC31222.1Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (536 aa)    
Predicted Functional Partners:
OSC23798.1
Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.943
OSC26682.1
Stage II sporulation protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.828
B8W69_24405
Hypothetical protein; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.828
OSC24294.1
Twin arginine-targeting protein translocase TatC; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.808
OSC22972.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.786
OSC29694.1
Ferrochelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.781
OSC29301.1
Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.
  
 
 0.768
OSC29195.1
Biliverdin-producing heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.767
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.752
OSC25172.1
NADH-quinone oxidoreductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.729
Your Current Organism:
Mycobacterium vulneris
NCBI taxonomy Id: 547163
Other names: CIP 109859, DSM 45247, JCM 18115, M. vulneris, Mycobacterium sp. ACS3670, Mycobacterium sp. ACS4093, Mycobacterium sp. ACS5020, Mycobacterium sp. ICS2043, Mycobacterium sp. NLA000700772, Mycobacterium sp. NLA009601918, Mycobacterium vulneris van Ingen et al. 2009, Mycolicibacterium vulneris, Mycolicibacterium vulneris (van Ingen et al. 2009) Gupta et al. 2018, strain NLA000700772
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.