STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmah_0777DEAD/DEAH box helicase domain protein; COGs: COG1202 Superfamily II helicase; InterPro IPR001650:IPR011545:IPR014001:IPR014021; KEGG: similar to CG7972-PA; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; SPTR: Q12ZD6 DEAD/DEAH box helicase-like protein; PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase. (827 aa)    
Predicted Functional Partners:
Mmah_0776
KEGG: sfu:Sfum_2330 hypothetical protein; SPTR: Q465H8 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF3467).
       0.844
Mmah_0778
COGs: COG0467 RecA-superfamily ATPase implicated in signal transduction; SPTR: Q12ZD5 Putative uncharacterized protein.
       0.809
Mmah_1923
Phosphoesterase RecJ domain protein; COGs: COG1107 RecJ-like exonuclease contains DnaJ-type Zn finger domain; InterPro IPR001305:IPR004365:IPR001667:IPR003029; KEGG: dat:HRM2_01850 RecJ-like exonuclease (DnaJ-type Zn finger protein); PFAM: phosphoesterase RecJ domain protein; nucleic acid binding OB-fold tRNA/helicase-type; DnaJ central domain protein; SPTR: Q12V35 Phosphoesterase, RecJ-like protein; PFAM: DHH family; DnaJ central domain (4 repeats); S1 RNA binding domain; OB-fold nucleic acid binding domain.
  
  
 0.742
tyrS
tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily.
 
     0.702
Mmah_1669
Transcriptional regulator, MarR family; COGs: COG1497 transcriptional regulator protein; InterPro IPR000835:IPR013196:IPR001808; PFAM: Helix-turn-helix type 11 domain protein; regulatory protein MarR; SMART: regulatory protein Crp; SPTR: Q12W99 Transcriptional regulator, Crp/Fnr family; PFAM: HTH domain.
 
     0.694
Mmah_0774
Hypothetical protein; SPTR: Q12ZD9 Putative uncharacterized protein.
       0.685
aroK
COGs: COG1685 shikimate kinase; InterPro IPR013750:IPR006204:IPR010189; KEGG: HSK; HSK (HOMOSERINE KINASE); homoserine kinase; K00872 homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein; PRIAM: Shikimate kinase; SPTR: Q12XK2 Shikimate kinase; TIGRFAM: shikimate kinase; PFAM: GHMP kinases N terminal domain; TIGRFAM: shikimate kinase.
 
     0.676
Mmah_0688
Sjogrens syndrome scleroderma autoantigen 1; COGs: COG1645 Uncharacterized Zn-finger containing protein; InterPro IPR009563; KEGG: hypothetical protein; PFAM: Sjogrens syndrome scleroderma autoantigen 1; SPTR: Q8PX36 Putative uncharacterized protein; PFAM: Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27).
  
     0.665
Mmah_1972
Methanogenesis marker protein 14; COGs: COG4065 conserved hypothetical protein; InterPro IPR008303; PFAM: conserved hypothetical protein; SPTR: Q12VG1 Putative uncharacterized protein; TIGRFAM: methanogenesis marker protein 14; PFAM: Uncharacterized protein conserved in archaea (DUF2114); TIGRFAM: putative methanogenesis marker protein 14.
  
     0.646
rps8e
COGs: COG2007 Ribosomal protein S8E; InterPro IPR001047; KEGG: RPS8; likely cytosolic ribosomal protein similar to S. cerevisiae RPS8A (YBL072C) and RPS8B (YER102W) small subunit protein; likely intron in 5' UTR; PFAM: Ribosomal protein S8E; SPTR: Q12UA1 30S ribosomal protein S8e; TIGRFAM: ribosomal protein S8e; PFAM: Ribosomal protein S8e; TIGRFAM: ribosomal protein S8.e.
 
     0.640
Your Current Organism:
Methanohalophilus mahii
NCBI taxonomy Id: 547558
Other names: M. mahii DSM 5219, Methanohalophilus mahii DSM 5219, Methanohalophilus mahii str. DSM 5219, Methanohalophilus mahii strain DSM 5219
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