STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmah_0884Protein of unknown function DUF1614; InterPro IPR011672; KEGG: bra:BRADO6889 hypothetical protein; PFAM: protein of unknown function DUF1614; SPTR: Q12XV6 Putative uncharacterized protein; PFAM: Protein of unknown function (DUF1614). (231 aa)    
Predicted Functional Partners:
Mmah_0885
PAS sensor protein; InterPro IPR013655:IPR001610:IPR000014:IPR000700; KEGG: dat:HRM2_27470 putative signal-transducing kinase with PAS/PAC domain; PFAM: PAS fold-3 domain protein; SMART: PAC repeat-containing protein; SPTR: Q8TPV4 Sensory transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: PAS fold; TIGRFAM: PAS domain S-box.
       0.623
Mmah_0886
Hypothetical protein; SPTR: Q12YF0 Putative uncharacterized protein.
       0.458
Mmah_0887
Hypothetical protein.
       0.450
Mmah_0255
Conserved hypothetical protein; COGs: COG0392 integral membrane protein; InterPro IPR005242; KEGG: maq:Maqu_3008 hypothetical protein; PFAM: conserved hypothetical protein; SPTR: Q12TG6 Putative uncharacterized protein; PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein.
 
     0.448
Mmah_0952
COGs: COG1456 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein); InterPro IPR001450:IPR007202:IPR017900; KEGG: bas:BUsg106 putative ferredoxin-like protein; PFAM: Fe-S cluster domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: Q12YZ5 Formylmethanofuran dehydrogenase, subunit G; PFAM: Putative Fe-S cluster; 4Fe-4S binding domain.
  
     0.432
Your Current Organism:
Methanohalophilus mahii
NCBI taxonomy Id: 547558
Other names: M. mahii DSM 5219, Methanohalophilus mahii DSM 5219, Methanohalophilus mahii str. DSM 5219, Methanohalophilus mahii strain DSM 5219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.