STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmah_1678SPTR: Q8TS77 Predicted protein. (97 aa)    
Predicted Functional Partners:
Mmah_1679
KEGG: mei:Msip34_2461 hypothetical protein; SPTR: Q8TTA7 Transmembrane protein MttP; PFAM: EamA-like transporter family.
       0.811
Mmah_1677
Hypothetical protein.
       0.782
Mmah_1680
Trimethylamine corrinoid protein; COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759:IPR012741; KEGG: geo:Geob_2541 cobalamin B12-binding domain protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; SPTR: Q12TR0 Trimethylamine corrinoid protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family.
       0.540
Mmah_1681
COGs: COG5598 Trimethylamine:corrinoid methyltransferase; KEGG: dol:Dole_1111 trimethylamine methyltransferase; SPTR: Q12TR2 Trimethylamine methyltransferase mttB; PFAM: Trimethylamine methyltransferase (MTTB).
       0.485
Mmah_1676
Dimethylamine corrinoid protein; COGs: COG5012 cobalamin binding protein; InterPro IPR006158:IPR003759:IPR012741; KEGG: geo:Geob_2541 cobalamin B12-binding domain protein; PFAM: cobalamin B12-binding domain protein; Methionine synthase B12-binding module cap domain protein; SPTR: Q12W94 Dimethylamine corrinoid protein; TIGRFAM: methyltransferase cognate corrinoid protein; PFAM: B12 binding domain; TIGRFAM: methyltransferase cognate corrinoid proteins, Methanosarcina family; methylmalonyl-CoA mutase C-terminal domain.
       0.474
Mmah_1682
COGs: COG5598 Trimethylamine:corrinoid methyltransferase; InterPro IPR012740; KEGG: dat:HRM2_15930 MttB6; SPTR: Q8TS73 Trimethylamine methyltransferase mttB2; TIGRFAM: trimethylamine; PFAM: Trimethylamine methyltransferase (MTTB); TIGRFAM: trimethylamine:corrinoid methyltransferase.
       0.428
Your Current Organism:
Methanohalophilus mahii
NCBI taxonomy Id: 547558
Other names: M. mahii DSM 5219, Methanohalophilus mahii DSM 5219, Methanohalophilus mahii str. DSM 5219, Methanohalophilus mahii strain DSM 5219
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