STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mmah_1885SPTR: Q8TI21 Predicted protein. (72 aa)    
Predicted Functional Partners:
Mmah_1886
COGs: COG0370 Fe2+ transport system protein B; InterProIPR006073:IPR011642:IPR013684:IPR002917:IPR 011619:IPR011640:IPR005225:IPR003373; KEGG: ppd:Ppro_3681 ferrous iron transport protein B; PFAM: GTP-binding protein HSR1-related; nucleoside recognition domain protein; Miro domain protein; Ferrous iron transport protein B domain protein; Ferrous iron transport B domain protein; SPTR: Q12UX1 Ferrous iron transport protein B; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleosid [...]
       0.640
Mmah_1887
Iron (metal) dependent repressor, DtxR family; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR007167:IPR001367; KEGG: dat:HRM2_42740 TroR; PFAM: FeoA family protein; iron dependent repressor; SMART: iron dependent repressor; SPTR: Q12UX2 Iron dependent repressor; PFAM: FeoA domain; Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain.
       0.567
Your Current Organism:
Methanohalophilus mahii
NCBI taxonomy Id: 547558
Other names: M. mahii DSM 5219, Methanohalophilus mahii DSM 5219, Methanohalophilus mahii str. DSM 5219, Methanohalophilus mahii strain DSM 5219
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.