Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
yejBInner membrane ABC transporter permease protein YejB. (364 aa)    
Predicted Functional Partners:
appA_2
Hypothetical protein.
  
 0.985
yejE
Inner membrane ABC transporter permease protein YejE.
 
  
 0.982
gsiA_7
Putative ABC transporter ATP-binding protein YejF; Belongs to the ABC transporter superfamily.
 
  
 0.975
ycgG_3
Protein Rtn.
      0.716
gsiA_15
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
     0.684
AML34988.1
Glutathione import ATP-binding protein GsiA.
 
     0.613
gsiA_19
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
     0.588
spr_1
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase.
      0.538
ddpC_4
Putative peptide transport system permease protein.
 
     0.503
gsiD_4
Putative peptide permease protein.
     0.494
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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