STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
appA_2Hypothetical protein. (601 aa)    
Predicted Functional Partners:
yejB
Inner membrane ABC transporter permease protein YejB.
  
 0.981
gsiA_7
Putative ABC transporter ATP-binding protein YejF; Belongs to the ABC transporter superfamily.
 
  
 0.963
yejE
Inner membrane ABC transporter permease protein YejE.
 
  
 0.963
ycgG_3
Protein Rtn.
      0.785
spr_1
Murein DD-endopeptidase MepS/Murein LD-carboxypeptidase.
 
    0.654
yeiU
Inner membrane protein YeiU.
 
      0.627
gsiA_15
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
  
 0.579
AML34988.1
Glutathione import ATP-binding protein GsiA.
 
  
 0.443
gsiA_19
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
 
  
 0.443
hisQ_1
Histidine transport system permease protein HisQ.
  
  
  0.440
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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