STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yehTTranscriptional regulatory protein YehT. (239 aa)    
Predicted Functional Partners:
yehU
Sensor histidine kinase YehU.
 
 0.982
ypdA_2
Sensor histidine kinase YpdA.
 
 0.885
barA
Signal transduction histidine-protein kinase BarA.
     
 0.713
yehS
Hypothetical protein.
     
 0.637
uvrY
Response regulator UvrY.
  
   
 0.523
tabA
Toxin-antitoxin biofilm protein TabA.
  
     0.497
AML34246.1
HTH-type transcriptional regulator MlrA.
       0.494
AML38569.1
Hypothetical protein.
  
     0.470
arcB_1
Aerobic respiration control sensor protein ArcB.
     
 0.440
AML37675.1
Protein YiaL.
  
     0.418
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.