Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
rbtDRibitol 2-dehydrogenase. (249 aa)    
Predicted Functional Partners:
araB_1
FGGY carbohydrate kinase domain-containing protein.
 
  
 0.996
araB_2
Ribulokinase.
    
  0.903
fabG_1
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
  
 0.745
entF
Enterobactin synthase component F.
 
    0.732
AML35445.1
Putative oxidoreductase YmfI.
  
    0.710
xylF_2
D-xylose-binding periplasmic protein.
  
     0.624
AML36270.1
Dehydrogenase/reductase SDR family protein 7-like.
  
     0.608
araG_3
Ribose import ATP-binding protein RbsA 2.
  
     0.578
AML38106.1
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
    0.548
AML38184.1
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
  
    0.545
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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