STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtlK_1D-arabinitol 4-dehydrogenase. (461 aa)    
Predicted Functional Partners:
xylB_6
Xylulose kinase.
 
  
 0.987
mtlA
PTS system mannitol-specific EIICBA component.
  
  
 0.952
xylB_1
Xylulose kinase.
 
  
 0.937
fruA_1
PTS system fructose-specific EIIBC component.
  
 
 0.918
hrsA
PTS system fructose-specific EIIABC component.
  
 
 0.913
AML37926.1
PTS system fructose-specific EIIABC component.
  
 
 0.913
iolC_1
Fructokinase; Belongs to the carbohydrate kinase PfkB family.
    
 0.911
xylA_4
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.911
yniC_2
2-deoxyglucose-6-phosphate phosphatase.
    
 0.904
fruA_2
PTS system fructose-specific EIIBBC component.
   
 
 0.904
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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