STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML34316.1O-antigen export system ATP-binding protein RfbB. (404 aa)    
Predicted Functional Partners:
AML34315.1
O-antigen export system permease protein RfbA.
 
  
 0.989
AML34319.1
Putative glycosyltransferase.
 
   0.968
AML34320.1
Putative glycosyltransferase.
 
   0.946
AML34318.1
D-inositol 3-phosphate glycosyltransferase.
 
   0.941
AML34317.1
Ubiquinone biosynthesis O-methyltransferase.
 
     0.938
algC
Phosphomannomutase.
     
 0.774
manC1
Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
     0.756
AML38971.1
Putative macrolide acetyltransferase.
 
 
    0.451
yadH
Inner membrane transport permease YadH.
  
  
 0.404
AML34308.1
D-inositol 3-phosphate glycosyltransferase.
  
 
   0.402
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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