STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML34353.1DNA replication protein gp18. (361 aa)    
Predicted Functional Partners:
AML34354.1
Replicative DNA helicase.
 
  
 0.830
AML34352.1
Hypothetical protein.
       0.774
AML34355.1
Protein ren.
       0.773
AML34386.1
Ig-like virion protein.
 
    0.727
AML34342.1
Recombination protein bet.
 
    0.655
AML37218.1
Hypothetical protein.
  
     0.571
AML34351.1
Regulatory protein CII.
       0.566
AML36098.1
Tail tape measure protein H.
  
     0.563
AML38698.1
Outer membrane usher protein PmfC.
  
     0.558
AML34339.1
DNA Methyl transferase.
 
     0.557
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.