Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AML34112.1 | polA | EAG7_00362 | EAG7_03964 | Bifunctional transcriptional activator/DNA repair enzyme Ada. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.541 |
AML34112.1 | recA | EAG7_00362 | EAG7_05193 | Bifunctional transcriptional activator/DNA repair enzyme Ada. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.556 |
AML34112.1 | umuC_3 | EAG7_00362 | EAG7_00651 | Bifunctional transcriptional activator/DNA repair enzyme Ada. | Protein UmuC. | 0.473 |
AML34793.1 | recA | EAG7_01048 | EAG7_05193 | Protein UmuD. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.960 |
AML34793.1 | umuC_3 | EAG7_01048 | EAG7_00651 | Protein UmuD. | Protein UmuC. | 0.961 |
dnaE_1 | dnaN_3 | EAG7_03148 | EAG7_04102 | DNA polymerase III subunit alpha; Belongs to the DNA polymerase type-C family. | DNA polymerase III subunit beta. | 0.995 |
dnaE_1 | holB_2 | EAG7_03148 | EAG7_02168 | DNA polymerase III subunit alpha; Belongs to the DNA polymerase type-C family. | DNA polymerase III subunit delta'. | 0.992 |
dnaE_1 | polA | EAG7_03148 | EAG7_03964 | DNA polymerase III subunit alpha; Belongs to the DNA polymerase type-C family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.608 |
dnaE_1 | recA | EAG7_03148 | EAG7_05193 | DNA polymerase III subunit alpha; Belongs to the DNA polymerase type-C family. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.613 |
dnaE_1 | umuC_3 | EAG7_03148 | EAG7_00651 | DNA polymerase III subunit alpha; Belongs to the DNA polymerase type-C family. | Protein UmuC. | 0.426 |
dnaN_3 | dnaE_1 | EAG7_04102 | EAG7_03148 | DNA polymerase III subunit beta. | DNA polymerase III subunit alpha; Belongs to the DNA polymerase type-C family. | 0.995 |
dnaN_3 | holB_2 | EAG7_04102 | EAG7_02168 | DNA polymerase III subunit beta. | DNA polymerase III subunit delta'. | 0.998 |
dnaN_3 | polA | EAG7_04102 | EAG7_03964 | DNA polymerase III subunit beta. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.984 |
dnaN_3 | polB_1 | EAG7_04102 | EAG7_03279 | DNA polymerase III subunit beta. | DNA polymerase II. | 0.982 |
dnaN_3 | recA | EAG7_04102 | EAG7_05193 | DNA polymerase III subunit beta. | Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.841 |
dnaN_3 | umuC_3 | EAG7_04102 | EAG7_00651 | DNA polymerase III subunit beta. | Protein UmuC. | 0.732 |
holB_2 | dnaE_1 | EAG7_02168 | EAG7_03148 | DNA polymerase III subunit delta'. | DNA polymerase III subunit alpha; Belongs to the DNA polymerase type-C family. | 0.992 |
holB_2 | dnaN_3 | EAG7_02168 | EAG7_04102 | DNA polymerase III subunit delta'. | DNA polymerase III subunit beta. | 0.998 |
holB_2 | polA | EAG7_02168 | EAG7_03964 | DNA polymerase III subunit delta'. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.838 |
holB_2 | polB_1 | EAG7_02168 | EAG7_03279 | DNA polymerase III subunit delta'. | DNA polymerase II. | 0.888 |
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