STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML34427.1long-chain-fatty-acid-CoA ligase. (1598 aa)    
Predicted Functional Partners:
AML34428.1
Phthiocerol synthesis polyketide synthase type I PpsE.
     0.990
AML34434.1
Phthiocerol synthesis polyketide synthase type I PpsE.
 0.988
AML34422.1
Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsE.
     0.987
hemL_3
Glutamate-1-semialdehyde 2,1-aminomutase.
 
  
 0.893
fadJ_1
Fatty acid oxidation complex subunit alpha.
  
 
 0.845
fadB_2
Fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
  
 
 0.845
AML34436.1
Gramicidin S biosynthesis protein GrsT.
 
  
 0.827
fabD_2
Malonyl CoA-acyl carrier protein transacylase.
    
 0.784
AML34461.1
Thioesterase.
  
 0.782
AML34420.1
Putative 4'-phosphopantetheinyl transferase.
 
  
 0.753
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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