STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML34453.1Type IV secretion system-like protein. (59 aa)    
Predicted Functional Partners:
AML34452.1
Type IV secretion system protein virB4.
  
  
 0.963
AML34450.1
Type IV secretion system protein VirB6.
  
  
 0.871
AML34447.1
Type IV secretion system protein virB9.
  
  
 0.853
AML34451.1
Hypothetical protein.
     
 0.835
AML34448.1
Type IV secretion system protein PtlE.
  
  
 0.823
AML34446.1
Type IV secretion system protein virB10.
  
  
 0.809
AML34454.1
Type IV secretion system protein virB1.
     
 0.656
AML36456.1
Outer membrane transporter protein IbpB.
   
    0.513
AML36711.1
Hemolysin transporter protein ShlB.
   
    0.513
shlB_2
Hemolysin transporter protein ShlB.
   
    0.513
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.