STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuAHigh-affinity zinc uptake system protein ZnuA. (314 aa)    
Predicted Functional Partners:
znuB
High-affinity zinc uptake system membrane protein ZnuB.
 
 
 0.998
znuC_1
Zinc import ATP-binding protein ZnuC.
 
 
 0.997
zinT
Metal-binding protein ZinT.
 
  
 0.976
lytM_3
Murein DD-endopeptidase MepM.
 
  
 0.911
AML34484.1
Putative iron transport system membrane protein.
 
  
 0.762
yusV_2
Manganese transport system ATP-binding protein MntB.
 
  
 0.735
mntB_1
Chelated iron transport system membrane protein YfeD.
 
  
 0.734
mntB_3
Manganese transport system membrane protein MntC.
 
  
 0.728
fhuC_1
Chelated iron transport system membrane protein YfeB.
 
  
 0.708
AML34496.1
29 kDa membrane protein in scaA 5'region.
 
  
 0.700
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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