STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sapB_2Peptide transport system permease protein SapB. (321 aa)    
Predicted Functional Partners:
dppA_5
Peptide transport periplasmic protein SapA.
  
 0.995
gsiA_16
Peptide transport system ATP-binding protein SapD.
 
 0.985
sapC
Peptide transport system permease protein SapC.
  
 0.896
gsiA_18
Peptide transport system ATP-binding protein SapF.
  
 0.831
dppC
Dipeptide transport system permease protein DppC.
 
     0.775
AML34993.1
Dipeptide transport system permease protein DppC.
 
     0.774
nikC
Nickel transport system permease protein NikC.
 
     0.774
AML38966.1
Putative D,D-dipeptide transport system permease protein DdpC.
 
     0.774
ddpC_4
Putative peptide transport system permease protein.
 
     0.772
gsiD_4
Putative peptide permease protein.
 
     0.772
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.