Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
yxeP_5Hippurate hydrolase. (389 aa)    
Predicted Functional Partners:
ykfG
UPF0758 protein; Belongs to the UPF0758 family. YicR subfamily.
      
 0.693
AML38998.1
UPF0758 protein YkfG.
      
 0.693
AML35413.1
Putative nitronate monooxygenase.
      
 0.692
norB
Quinolone resistance protein NorB.
       0.689
AML35444.1
Toxin-antitoxin biofilm protein TabA.
      
 0.689
tabA
Toxin-antitoxin biofilm protein TabA.
      
 0.689
pflA_1
Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.
     
 0.643
hpdA
Putative pyruvate formate-lyase 3-activating enzyme.
     
 0.640
AML36111.1
DNA-packaging protein NU1 like.
      
 0.633
AML34950.1
Putative HTH-type transcriptional regulator.
       0.519
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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