STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pspCPhage shock protein C. (119 aa)    
Predicted Functional Partners:
pspB
Phage shock protein B.
 
 
 0.999
AML34954.1
Phage shock protein A.
 
 
 0.995
AML34957.1
Phage shock protein D.
  
  
 0.956
arcB_1
Aerobic respiration control sensor protein ArcB.
  
 
 0.921
barA
Signal transduction histidine-protein kinase BarA.
  
 
 0.888
pspF_1
Psp operon transcriptional activator.
 
   
 0.800
rcsD_1
Sensor-like histidine kinase RcsD.
  
 
 0.795
glrK
Sensor histidine kinase GlrK.
  
   0.757
ycjF
UPF0283 membrane protein YcjF.
 
   
 0.751
uspE
Universal stress protein E.
  
     0.751
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.