STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML34961.1Protein AbrB. (349 aa)    
Predicted Functional Partners:
agp_3
Glucose-1-phosphatase.
  
     0.598
aaeB_2
Putative transporter YdhK.
  
     0.536
tyrR_1
Transcriptional regulatory protein TyrR.
       0.514
ycjX
Hypothetical protein.
 
     0.485
ynfM_2
Inner membrane transport protein YnfM.
  
     0.479
AML34087.1
Hypothetical protein.
  
    0.464
yijE
Putative inner membrane transporter yiJE.
  
     0.460
AML34088.1
UPF0065 protein YflP.
 
    0.431
ycjF
UPF0283 membrane protein YcjF.
 
     0.430
pspB
Phage shock protein B.
 
     0.422
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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