Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
lamB_1Maltoporin. (458 aa)    
Predicted Functional Partners:
lptE
LPS-assembly lipoprotein LptE; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.
  
   
 0.773
allS_2
Putative HTH-type transcriptional regulator YhaJ; Belongs to the LysR transcriptional regulatory family.
      
 0.691
scrY_1
Sucrose porin.
  
  
  0.672
ybbH_1
Putative HTH-type transcriptional regulator.
  
     0.671
hnr_2
Regulator of RpoS.
  
     0.668
malE
Maltose-binding periplasmic protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins.
 
  
 0.662
ynfB
UPF0482 protein.
      
 0.639
tsx
Nucleoside-specific channel-forming protein tsx.
     
 0.638
slyA_3
Transcriptional regulator SlyA.
  
   
 0.623
lamB_3
Maltoporin.
  
  
 
0.612
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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