Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AML35009.1Chromosome-partitioning protein Spo0J. (262 aa)    
Predicted Functional Partners:
AML35010.1
Hypothetical protein.
       0.773
AML35011.1
Hypothetical protein.
       0.773
AML35012.1
Hypothetical protein.
       0.773
AML35013.1
Hypothetical protein.
       0.773
AML35014.1
Eaa protein.
       0.773
AML37255.1
ParA family protein.
  
 
 0.625
AML38051.1
Cellulose biosynthesis protein BcsQ.
  
 
 0.625
rsmG
Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.579
AML35007.1
Hypothetical protein.
       0.434
AML35008.1
Hypothetical protein.
       0.434
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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