STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tcyC_3Glutamate transport ATP-binding protein GluA. (258 aa)    
Predicted Functional Partners:
yecS_6
Inner membrane amino-acid ABC transporter permease protein YecS.
 0.999
yecS_5
Inner membrane amino-acid ABC transporter permease protein YecS.
 
 0.977
glnP_1
Glutamine transport system permease protein GlnP.
 
 0.956
gltK
Glutamate/aspartate transport system permease protein GltK.
 
 0.933
fliY_3
Cystine-binding periplasmic protein.
   0.927
fliY_4
Cystine-binding periplasmic protein.
 
 0.914
gsiA_5
Nickel import ATP-binding protein NikD.
 
    
0.905
artQ_1
Arginine transport system permease protein ArtQ.
 
 0.875
tcyB
Putative glutamine ABC transporter permease protein GlnM.
 
 0.870
yhdY
General L-amino acid transport system permease protein AapM.
 
 
 0.869
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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