STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML35172.1Tautomerase PptA. (75 aa)    
Predicted Functional Partners:
ybhC_2
Putative acyl-CoA thioester hydrolase YbhC.
  
     0.654
AML35171.1
Putative GST-like protein YncG.
       0.627
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes.
 
      0.606
yieL_2
Hypothetical protein.
  
     0.598
betA
Oxygen-dependent choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.
 
      0.536
AML33949.1
Esterase YpfH.
  
   
 0.522
AML38394.1
UPF0718 protein YraQ.
  
     0.522
AML35170.1
Hypothetical protein.
       0.492
rna
Ribonuclease I; Belongs to the RNase T2 family.
  
     0.484
AML36152.1
Hypothetical protein.
  
     0.473
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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