STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ddpC_4Putative peptide transport system permease protein. (283 aa)    
Predicted Functional Partners:
gsiA_15
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
  
 0.993
gsiB_5
Glutathione-binding protein GsiB.
 
 0.983
gsiA_14
Oligopeptide transport ATP-binding protein AppD; Belongs to the ABC transporter superfamily.
  
 0.981
dppD
Dipeptide transport ATP-binding protein DppD; Belongs to the ABC transporter superfamily.
  
 0.979
AML38965.1
Putative D,D-dipeptide transport ATP-binding protein DdpD.
  
 0.978
gsiA_11
Oligopeptide transport ATP-binding protein OppD; Belongs to the ABC transporter superfamily.
  
 0.974
gsiA_5
Nickel import ATP-binding protein NikD.
  
 0.974
gsiC_5
Glutathione transport system permease protein GsiC.
  
 0.973
gsiA_13
Oligopeptide transport ATP-binding protein AppF.
  
 0.971
gsiA_16
Peptide transport system ATP-binding protein SapD.
 
   
 0.967
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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