STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdhF_3Protein YdeP. (766 aa)    
Predicted Functional Partners:
fdhD
Protein FdhD like; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.
  
 0.933
porA
Putative pyruvate-flavodoxin oxidoreductase.
  
  
 0.604
gltB
Glutamate synthase [NADPH] large chain.
  
 
 0.601
AML38989.1
Cytochrome c-type protein TorY.
  
 
 0.562
fdnH
Formate dehydrogenase, nitrate-inducible, iron-sulfur subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.
  
 
 0.536
AML35484.1
Anaerobic dimethyl sulfoxide reductase chain B.
  
 
 0.536
dmsB_2
Anaerobic dimethyl sulfoxide reductase chain B.
  
 
 0.536
fdoH
Formate dehydrogenase-O iron-sulfur subunit; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.
  
 
 0.536
AML35630.1
Hypothetical protein.
  
 
 0.509
fdnI
Formate dehydrogenase, nitrate-inducible, cytochrome b556(Fdn) subunit.
  
 
 0.485
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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