STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML35287.1Putative 24.6 kDa protein in ccpA 3'region. (409 aa)    
Predicted Functional Partners:
AML35289.1
Hypothetical protein.
 
  
 0.997
AML34980.1
Hypothetical protein.
 
  
 0.988
AML35285.1
Hypothetical protein.
 
  
 0.988
AML35286.1
Hypothetical protein.
  
 0.987
AML35288.1
Hypothetical protein.
 
 
 0.980
AML34979.1
Hypothetical protein.
 
  
 0.977
AML34789.1
Hypothetical protein.
 
  
 0.969
AML35290.1
Protein ClpV1.
 
  
 0.955
AML35294.1
Putative type VI secretion system protein VgrGB.
 
  
 0.955
AML34771.1
Hypothetical protein.
  
 0.946
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.