STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iolS_2Putative aldo-keto reductase 2. (393 aa)    
Predicted Functional Partners:
tas_2
Putative oxidoreductase YrpG.
 
    
0.717
trpS2_2
Tryptophan--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.594
hpd
Hemolysin VllY.
  
  
 0.570
ytbE
Prostaglandin F synthase.
 
 
 0.488
AML35355.1
Putative HTH-type transcriptional regulator YcaN.
 
     0.482
AML35618.1
Hypothetical protein.
 
    0.467
dkgA
2,5-diketo-D-gluconic acid reductase A.
 
 
 0.436
tyrA
T-protein.
     
 0.423
pheA
P-protein.
     
 0.409
folA
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis (By similarity).
   
  
 0.405
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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