STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML35379.1Hypothetical protein. (538 aa)    
Predicted Functional Partners:
AML34847.1
Inner membrane ABC transporter permease protein YnjC.
  
     0.703
AML35378.1
Hypothetical protein.
       0.568
AML38004.1
Inner membrane protein YibH.
  
   
 0.564
AML38447.1
Glucosidase YgjK.
  
     0.523
AML36586.1
Hypothetical protein.
  
     0.515
namA
NADPH dehydrogenase.
       0.504
nlpE
Lipoprotein NlpE.
  
     0.474
AML36118.1
Antitoxin HicB 2.
  
   
 0.472
ynjF
Inner membrane protein YnjF; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
     0.464
yijE
Putative inner membrane transporter yiJE.
  
     0.441
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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