STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML35439.1Hypothetical protein. (411 aa)    
Predicted Functional Partners:
pdxA2
4-hydroxythreonine-4-phosphate dehydrogenase 2; Belongs to the PdxA family.
     0.980
AML35890.1
4-hydroxythreonine-4-phosphate dehydrogenase.
     0.904
pdxA1
4-hydroxythreonine-4-phosphate dehydrogenase 1; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).
     0.831
glcR_2
Putative HTH-type transcriptional regulator.
 
    0.822
AML35888.1
2-keto-3-deoxygluconate permease 1.
 
   
 0.789
AML36605.1
2-keto-3-deoxygluconate permease.
 
   
 0.672
AML35443.1
Hypothetical protein.
 
     0.653
dapA_3
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
     0.632
AML35442.1
High affinity choline transporter 1.
 
     0.558
AML35424.1
Putative aldolase class 2 protein YgbL.
 
  
 0.544
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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