STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lacZ_2Beta-galactosidase 1; Belongs to the glycosyl hydrolase 2 family. (1035 aa)    
Predicted Functional Partners:
galM_3
Aldose 1-epimerase.
 
 
 0.949
AML38451.1
Evolved beta-galactosidase subunit beta.
   
 0.936
AML38452.1
Evolved beta-galactosidase subunit alpha.
  
  
 
0.918
melA
Alpha-galactosidase.
 
  
 0.913
glk_1
Glucokinase; Belongs to the bacterial glucokinase family.
     
 0.905
galK
Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.841
xylA_4
Xylose isomerase; Belongs to the xylose isomerase family.
    
 0.831
lacY_4
Lactose permease.
 
  
 0.805
rpoD
RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.
      
 0.607
pstA
Phosphate transport system permease protein PstA.
      
 0.595
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.