STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmsA_1Putative dimethyl sulfoxide reductase chain YnfE. (811 aa)    
Predicted Functional Partners:
AML35484.1
Anaerobic dimethyl sulfoxide reductase chain B.
 
 0.976
dmsD_2
Tat proofreading chaperone DmsD.
 
 0.964
dmsC_1
Anaerobic dimethyl sulfoxide reductase chain YnfH.
 
 
 0.952
AML35630.1
Hypothetical protein.
  
 0.948
dmsB_2
Anaerobic dimethyl sulfoxide reductase chain B.
 
 0.905
trxB
Thioredoxin reductase.
     
 0.902
cysD_1
Sulfate adenylyltransferase subunit 2.
     
 0.900
cysN
Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
  0.900
dmsC_2
Anaerobic dimethyl sulfoxide reductase chain C.
 
 
 0.811
AML38989.1
Cytochrome c-type protein TorY.
 
 
 0.756
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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