STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmsD_2Tat proofreading chaperone DmsD. (202 aa)    
Predicted Functional Partners:
dmsA_1
Putative dimethyl sulfoxide reductase chain YnfE.
 
 0.964
dmsC_1
Anaerobic dimethyl sulfoxide reductase chain YnfH.
 
  
 0.922
dmsA_2
Dimethyl sulfoxide reductase DmsA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.910
AML35484.1
Anaerobic dimethyl sulfoxide reductase chain B.
 
  
 0.880
dmsC_2
Anaerobic dimethyl sulfoxide reductase chain C.
 
  
 0.794
dmsB_2
Anaerobic dimethyl sulfoxide reductase chain B.
 
  
 0.689
torZ_2
Biotin sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 
 0.633
AML38990.1
Trimethylamine-N-oxide reductase.
 
 
 0.621
clcB
Voltage-gated ClC-type chloride channel ClcB.
       0.523
dcuA
Anaerobic C4-dicarboxylate transporter DcuA; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.
  
     0.443
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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