STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mdtJSpermidine export protein MdtJ; Catalyzes the excretion of spermidine. (120 aa)    
Predicted Functional Partners:
mdtI
Spermidine export protein MdtI; Catalyzes the excretion of spermidine.
 
  
 0.997
AML37233.1
Multidrug transporter.
  
     0.774
AML34715.1
Cold shock-like protein CspC.
      
 0.541
AML35851.1
Hypothetical protein.
      
 0.541
AML36477.1
Cold shock-like protein.
      
 0.541
AML38026.1
Cold shock protein CspA.
      
 0.541
AML35498.1
Putative signaling protein.
       0.532
cspD
Cold shock-like protein CspD.
      
 0.491
sugE_2
Quaternary ammonium compound-resistance protein SugE.
 
   
 0.489
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.