Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AML35624.1Hypothetical protein. (403 aa)    
Predicted Functional Partners:
AML35623.1
Diaminopropionate ammonia-lyase.
  
 0.982
AML35625.1
D-phenylhydantoinase.
 
  
 0.919
AML35622.1
Hypothetical protein.
 
  
 0.899
AML35631.1
Protein SsnA.
 
  
 0.835
AML35630.1
Hypothetical protein.
 
    0.803
AML35627.1
Hypothetical protein.
 
    0.771
AML35626.1
Carbamate kinase-like protein YqeA.
 
   
 0.726
AML35628.1
Hypothetical protein.
 
     0.724
AML35640.1
Putative xanthine dehydrogenase subunit D.
 
  
 0.720
AML35639.1
Nicotinate dehydrogenase small FeS subunit.
 
   
 0.586
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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