STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmFCytochrome c-type biogenesis protein CcmF. (900 aa)    
Predicted Functional Partners:
AML38987.1
Cytochrome c-type biogenesis protein CcmH.
  
 0.979
AML38986.1
Thiol:disulfide interchange protein DsbE.
  
 0.946
AML38984.1
Cytochrome c-type biogenesis protein CcmE.
 
 
 0.926
ccmC
Heme exporter protein C; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.
 
  
 0.897
AML38981.1
Heme exporter protein B.
 
  
 0.882
AML38980.1
Cytochrome c biogenesis ATP-binding export protein CcmA.
 
   
 0.879
AML35266.1
Protein DipZ.
  
  
 0.831
AML35665.1
Gluconate 2-dehydrogenase cytochrome c subunit.
 
   
 0.813
msrAB
Thioredoxin-like protein.
  
  
 0.771
AML38983.1
Heme exporter protein D.
 
  
 0.740
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.