STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML35696.1Putative transcriptional regulator. (299 aa)    
Predicted Functional Partners:
AML35694.1
Hypothetical protein.
 
  
 0.758
AML35695.1
Transcription regulatory protein OpdE.
     0.709
AML34876.1
Acyl-CoA thioester hydrolase YciA.
   
  
 0.553
metC_2
Cystathionine beta-lyase.
   
  
 0.545
metC_1
Cystathionine beta-lyase MetC.
   
  
 0.545
hcaR_1
Transcriptional activator protein LysR; Belongs to the LysR transcriptional regulatory family.
  
     0.522
AML36825.1
Putative HTH-type transcriptional regulator YnfL.
  
     0.508
hcaR_2
Putative HTH-type transcriptional regulator YbhD; Belongs to the LysR transcriptional regulatory family.
  
     0.507
cmpR_1
Putative HTH-type transcriptional regulator LrhA; Belongs to the LysR transcriptional regulatory family.
  
     0.498
cmpR_2
Putative HTH-type transcriptional regulator YeiE; Belongs to the LysR transcriptional regulatory family.
  
     0.497
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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