STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML35709.1Hypothetical protein. (345 aa)    
Predicted Functional Partners:
ssuA_2
Putative acyl-CoA dehydrogenase YdbM.
 
    0.940
ssuA_3
Putative aliphatic sulfonates-binding protein.
 
     0.920
ssuD_2
Methanesulfonate monooxygenase.
 
  
 0.912
AML35715.1
Hypothetical protein.
 
     0.725
ssuC_3
Putative aliphatic sulfonates transport permease protein SsuC.
 
  
 0.694
ssuE
FMN reductase (NADPH).
 
    0.688
AML35212.1
Hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
    0.659
gltC_3
HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family.
 
     0.634
ybbH_3
Putative HTH-type transcriptional regulator.
 
     0.633
AML35714.1
Cysteine dioxygenase.
 
    0.626
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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