STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AML35753.1Vitamin B12 import ATP-binding protein BtuD. (249 aa)    
Predicted Functional Partners:
btuC
Vitamin B12 import system permease protein BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.
 
 0.995
bsaA_1
Vitamin B12 transport periplasmic protein BtuE; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent.
 
  
 0.919
btuF
Vitamin B12-binding protein.
  
 
 0.912
AML35896.1
Lipoprotein-releasing system ATP-binding protein LolD.
  
     0.741
thiQ_1
Putative ABC transporter ATP-binding protein.
  
     0.635
yusV_2
Manganese transport system ATP-binding protein MntB.
  
     0.578
AML35755.1
Hypothetical protein.
       0.568
spr_2
Putative endopeptidase NlpC.
       0.563
hnr_2
Regulator of RpoS.
  
     0.535
AML38308.1
Hypothetical protein.
  
     0.509
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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