STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hnr_2Regulator of RpoS. (337 aa)    
Predicted Functional Partners:
arcB_1
Aerobic respiration control sensor protein ArcB.
 
 
 0.963
rssA_1
NTE family protein RssA.
 
  
 0.836
barA
Signal transduction histidine-protein kinase BarA.
 
 
 0.832
cpxA
Sensor protein CpxA.
 
 
 
 0.778
tdk
Thymidine kinase.
 
     0.774
AML38308.1
Hypothetical protein.
  
     0.763
iraP
Anti-adapter protein IraP; Inhibits RpoS proteolysis by regulating RssB activity, thereby increasing the stability of the sigma stress factor RpoS especially during phosphate starvation, but also in stationary phase and during nitrogen starvation. Its effect on RpoS stability is due to its interaction with RssB, which probably blocks the interaction of RssB with RpoS, and the consequent delivery of the RssB-RpoS complex to the ClpXP protein degradation pathway.
    
 
 0.754
csrD_2
RNase E specificity factor CsrD.
 
  
 0.733
rcsD_1
Sensor-like histidine kinase RcsD.
 
 
 0.727
AML36073.1
Chemotaxis protein CheA.
  
 
 0.718
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
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