STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
narXNitrate/nitrite sensor protein NarX. (592 aa)    
Predicted Functional Partners:
narL
Nitrate/nitrite response regulator protein NarL.
 0.999
narK
Nitrate/nitrite transporter NarK.
 
  
 0.739
uhpA_1
Transcriptional regulatory protein UhpA.
 
 
 0.731
AML38066.1
Putative HTH-type transcriptional regulator YhjB.
 
 
 0.706
uvrY
Response regulator UvrY.
 
 
 0.674
csgD_1
CsgBAC operon transcriptional regulatory protein.
 
 
 0.650
rcsB
Capsular synthesis regulator component B; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions.
 
 
 0.613
narJ_1
Nitrate reductase molybdenum cofactor assembly chaperone NarJ.
 
   
 0.594
AML38388.1
Hypothetical protein.
 
     0.550
ldcC
Lysine decarboxylase, constitutive.
      
 0.547
Your Current Organism:
Klebsiella aerogenes
NCBI taxonomy Id: 548
Other names: ATCC 13048, Aerobacter aerogenes, CIP 60.86, DSM 30053, Enterobacter aerogenes, HAMBI 101, IFO 13534, K. aerogenes, KCTC 2190, Klebsiella mobilis, LMG 2094, LMG:2094, NBRC 13534, NCAIM B.01467, NCTC 10006
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.